Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_00275 | Not Available | Positive | 354737 - 354904 | 6076.53 |
| helix-turn-helix domain protein | CK234_00276 | Not Available | Positive | 355047 - 355340 | 11695.3 |
| nyn domain protein | CK234_00277 | Not Available | Positive | 355397 - 356101 | 26201.6 |
| prtrc system thif family protein | CK234_00278 | Not Available | Negative | 356185 - 356976 | 29577.7 |
| prtrc system protein b | CK234_00279 | Not Available | Negative | 356973 - 357674 | 26659.8 |
| hypothetical protein | CK234_00280 | Not Available | Negative | 357685 - 358794 | 43079.1 |
| prtrc system protein c | CK234_00281 | Not Available | Negative | 358831 - 359052 | 8376.01 |
| prtrc system protein e | CK234_00282 | Not Available | Negative | 359075 - 360163 | 40651.3 |
| hypothetical protein | CK234_00283 | Not Available | Negative | 360183 - 360392 | 7921.67 |
| hypothetical protein | CK234_00284 | Not Available | Negative | 360411 - 360623 | 7752.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

