Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding protein, histone-like | CK234_03078 | Not Available | Negative | 3841644 - 3842012 | 13766.9 |
| putative dna-binding protein, histone-like | CK234_03079 | Not Available | Negative | 3842033 - 3842533 | 17891.4 |
| hypothetical protein | CK234_03080 | Not Available | Positive | 3842721 - 3843155 | 16493.8 |
| hypothetical protein | CK234_03081 | Not Available | Positive | 3843388 - 3844236 | 33883.5 |
| glucose-1-phosphate cytidylyltransferase | CK234_03082 | Not Available | Positive | 3844408 - 3845388 | 37206.4 |
| cdp-glucose 4,6-dehydratase | CK234_03083 | Not Available | Positive | 3845408 - 3845857 | 16344.8 |
| cdp-glucose 4,6-dehydratase | CK234_03084 | Not Available | Positive | 3845854 - 3846741 | 33150.1 |
| cdp-glucose 4,6-dehydratase | CK234_03085 | Not Available | Positive | 3846778 - 3847248 | 17497.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CK234_03086 | Not Available | Positive | 3847248 - 3847802 | 20113.0 |
| hypothetical protein | CK234_03087 | Not Available | Positive | 3849125 - 3849553 | 16662.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

