Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short repeat of unknown function (duf308) | CK234_03068 | Not Available | Negative | 3828389 - 3828952 | 20986.6 |
| putative na(+)/h(+) antiporter, nhac-like | CK234_03069 | Not Available | Positive | 3829147 - 3830598 | 51427.2 |
| aminopeptidase e | CK234_03070 | Not Available | Positive | 3830710 - 3832086 | 51854.2 |
| hypothetical protein | CK234_03071 | Not Available | Positive | 3832584 - 3833384 | 30523.7 |
| intracellular exo-alpha-l-arabinofuranosidase 2 | CK234_03072 | Not Available | Positive | 3833764 - 3835287 | 57343.5 |
| nuclease precursor | CK234_03073 | Not Available | Negative | 3835377 - 3836234 | 32389.9 |
| alpha-l-fucosidase | CK234_03074 | Not Available | Positive | 3836359 - 3837708 | 51875.6 |
| carbohydrate family 9 binding domain-like protein | CK234_03075 | Not Available | Positive | 3837727 - 3839766 | 79671.4 |
| hypothetical protein | CK234_03076 | Not Available | Positive | 3840190 - 3841020 | 31720.1 |
| n-acetylmuramoyl-l-alanine amidase | CK234_03077 | Not Available | Negative | 3841086 - 3841505 | 15499.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

