Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trna-specific 2-thiouridylase, mnma-like | CK234_03048 | Not Available | Negative | 3807154 - 3808248 | 41490.9 |
| coenzyme f420 hydrogenase, subunit gamma | CK234_03049 | Not Available | Negative | 3808281 - 3809060 | 28574.3 |
| glycosyl transferase family 11 | CK234_03050 | Not Available | Negative | 3810193 - 3811038 | 33694.5 |
| small-conductance mechanosensitive channel | CK234_03051 | Not Available | Positive | 3811950 - 3812795 | 30929.2 |
| outer membrane protein beta-barrel domain protein | CK234_03052 | Not Available | Positive | 3812829 - 3813506 | 25186.4 |
| cyclic nucleotide-gated potassium channel | CK234_03053 | Not Available | Positive | 3813672 - 3814430 | 28946.1 |
| outer membrane protein beta-barrel domain protein | CK234_03054 | Not Available | Positive | 3814659 - 3815297 | 22850.2 |
| hypothetical protein | CK234_03055 | Not Available | Negative | 3815322 - 3815474 | 5870.12 |
| hypothetical protein | CK234_03056 | Not Available | Positive | 3815603 - 3816184 | 23560.9 |
| outer membrane protein beta-barrel domain protein | CK234_03057 | Not Available | Positive | 3816206 - 3816727 | 19772.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

