Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | CK234_03038 | Not Available | Positive | 3789868 - 3791730 | 70185.9 |
| arylsulfatase | CK234_03039 | Not Available | Positive | 3791753 - 3793327 | 61200.8 |
| putative sensor histidine kinase, tods-like | CK234_03040 | Not Available | Negative | 3793384 - 3797271 | 148455.0 |
| glycosyl hydrolase family 65, n-terminal domain | CK234_03041 | Not Available | Negative | 3797476 - 3799932 | 92116.2 |
| putative coenzyme pqq biosynthesis probable peptidase, pqqf-like | CK234_03042 | Not Available | Negative | 3800031 - 3801251 | 46465.1 |
| putative log family protein, yvdd-like | CK234_03043 | Not Available | Positive | 3801353 - 3801889 | 19870.1 |
| putative arabinose 5-phosphate isomerase, kdsd-like | CK234_03044 | Not Available | Positive | 3801907 - 3802509 | 21797.5 |
| ribokinase | CK234_03045 | Not Available | Positive | 3802620 - 3803540 | 34622.3 |
| chitinase a1 precursor | CK234_03046 | Not Available | Positive | 3803580 - 3804617 | 38584.8 |
| aminopeptidase n | CK234_03047 | Not Available | Negative | 3804628 - 3807150 | 97381.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

