Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | CK234_03028 | Not Available | Positive | 3776637 - 3778121 | 55584.1 |
| calcineurin-like phosphoesterase | CK234_03029 | Not Available | Positive | 3778147 - 3779148 | 36945.0 |
| protein of unknown function (duf2851) | CK234_03030 | Not Available | Negative | 3779306 - 3780571 | 48573.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | CK234_03031 | Not Available | Positive | 3780655 - 3781410 | 27422.6 |
| signal peptidase i | CK234_03032 | Not Available | Positive | 3781414 - 3782838 | 55209.5 |
| signal peptidase i | CK234_03033 | Not Available | Positive | 3782876 - 3783739 | 32796.6 |
| wbqc-like protein family protein | CK234_03034 | Not Available | Positive | 3783739 - 3784395 | 25575.3 |
| putative oxidoreductase, uxub-like | CK234_03035 | Not Available | Positive | 3784400 - 3785212 | 28669.7 |
| mannonate dehydratase | CK234_03036 | Not Available | Positive | 3785252 - 3786427 | 44473.5 |
| tonb-linked outer membrane protein, susc/raga family | CK234_03037 | Not Available | Positive | 3786642 - 3789863 | 118849.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

