Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tola-like protein | CK234_03008 | Not Available | Positive | 3754734 - 3755627 | 31428.5 |
| putative chaperone protein, yajl-like | CK234_03009 | Not Available | Positive | 3755631 - 3756182 | 19256.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase 2 | CK234_03010 | Not Available | Positive | 3756179 - 3756838 | 24326.4 |
| putative atp-dependent dna helicase, recg-like | CK234_03011 | Not Available | Positive | 3756840 - 3758936 | 79759.0 |
| nucleoside diphosphate kinase | CK234_03012 | Not Available | Positive | 3759157 - 3759621 | 17401.2 |
| putative murein dd-endopeptidase, mepm-like | CK234_03013 | Not Available | Positive | 3759644 - 3760534 | 33332.2 |
| protein of unknown function (duf1599) | CK234_03014 | Not Available | Positive | 3760648 - 3761190 | 20764.0 |
| hypothetical protein | CK234_03015 | Not Available | Positive | 3761237 - 3762481 | 47792.8 |
| triosephosphate isomerase | CK234_03016 | Not Available | Positive | 3762512 - 3763267 | 26875.2 |
| sporulation related domain protein | CK234_03017 | Not Available | Positive | 3763373 - 3763831 | 17067.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

