Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02998 | Not Available | Negative | 3744207 - 3744482 | 10421.8 |
| sbcd-like nuclease | CK234_02999 | Not Available | Positive | 3744654 - 3745856 | 44927.8 |
| sbcc-like nuclease | CK234_03000 | Not Available | Positive | 3745853 - 3748936 | 116300.0 |
| hypothetical protein | CK234_03001 | Not Available | Positive | 3748985 - 3749437 | 17225.2 |
| hypothetical protein | CK234_03002 | Not Available | Positive | 3749543 - 3750145 | 23224.4 |
| lipid a 3-o-deacylase (pagl) | CK234_03003 | Not Available | Negative | 3750396 - 3751706 | 49681.4 |
| putative inorganic polyphosphate/atp-nad kinase | CK234_03004 | Not Available | Negative | 3751878 - 3752765 | 32784.2 |
| pyridoxine 5'-phosphate synthase | CK234_03005 | Not Available | Positive | 3752869 - 3753585 | 26433.6 |
| tolq protein | CK234_03006 | Not Available | Positive | 3753582 - 3754298 | 25871.1 |
| tolr protein | CK234_03007 | Not Available | Positive | 3754347 - 3754724 | 14365.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

