Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ktr system potassium uptake protein a | CK234_02988 | Not Available | Positive | 3727121 - 3727807 | 25637.0 |
| protein of unknown function (duf4738) | CK234_02989 | Not Available | Positive | 3728022 - 3728591 | 21225.6 |
| putative beta-lactamase-inhibitor-like, pepsy-like | CK234_02990 | Not Available | Positive | 3728684 - 3729124 | 16654.3 |
| beta-galactosidase precursor | CK234_02991 | Not Available | Positive | 3729357 - 3731045 | 63436.3 |
| putative hth-type transcriptional activator, rhas-like | CK234_02992 | Not Available | Positive | 3731233 - 3734073 | 108698.0 |
| tonb-linked outer membrane protein, susc/raga family | CK234_02993 | Not Available | Positive | 3734285 - 3737233 | 108829.0 |
| susd family protein | CK234_02994 | Not Available | Positive | 3737255 - 3738889 | 62640.4 |
| alpha-xylosidase | CK234_02995 | Not Available | Positive | 3738959 - 3741418 | 95214.7 |
| putative beta-l-arabinofuranosidase | CK234_02996 | Not Available | Positive | 3741472 - 3743823 | 88886.3 |
| putative higb-2-like toxin | CK234_02997 | Not Available | Negative | 3743876 - 3744217 | 12875.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

