Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tyrosine recombinase, xerc-like | CK234_00265 | Not Available | Positive | 347613 - 348851 | 47711.4 |
| helix-turn-helix domain protein | CK234_00266 | Not Available | Negative | 348941 - 349231 | 11385.9 |
| hypothetical protein | CK234_00267 | Not Available | Negative | 349234 - 349515 | 10896.5 |
| putative tyrosine recombinase, xerd-like | CK234_00268 | Not Available | Negative | 349637 - 350059 | 16257.0 |
| putative type iv ta system abieii-like nucleotidyl transferase toxin | CK234_00269 | Not Available | Negative | 350151 - 351026 | 33791.7 |
| transcriptional regulator, abiei antitoxin | CK234_00270 | Not Available | Negative | 351031 - 351612 | 22068.0 |
| dna primase, catalytic core | CK234_00271 | Not Available | Positive | 351859 - 352746 | 33642.3 |
| protein of unknown function (duf4121) | CK234_00272 | Not Available | Negative | 352818 - 353597 | 30511.1 |
| dna binding domain, excisionase family | CK234_00273 | Not Available | Negative | 353982 - 354284 | 11895.5 |
| hypothetical protein | CK234_00274 | Not Available | Negative | 354292 - 354576 | 11114.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

