Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_02978 | Not Available | Positive | 3713368 - 3716619 | 121740.0 |
| starch-binding associating with outer membrane | CK234_02979 | Not Available | Positive | 3716631 - 3718052 | 53367.3 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_02980 | Not Available | Positive | 3718071 - 3719252 | 43766.7 |
| hypothetical protein | CK234_02981 | Not Available | Positive | 3719524 - 3719865 | 13586.3 |
| transposase | CK234_02982 | Not Available | Positive | 3719924 - 3720844 | 35878.5 |
| Trna-glu | Not Available | Not Available | Positive | 3721029 - 3721103 | Not Available |
| hypothetical protein | CK234_02984 | Not Available | Positive | 3721246 - 3722535 | 48157.5 |
| endonuclease 4 | CK234_02985 | Not Available | Positive | 3722578 - 3723414 | 31427.5 |
| tryptophan synthase beta chain | CK234_02986 | Not Available | Negative | 3723730 - 3725094 | 50244.2 |
| ktr system potassium uptake protein b | CK234_02987 | Not Available | Positive | 3725271 - 3727118 | 68631.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

