Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoyl-coa synthase | CK234_02968 | Not Available | Negative | 3700521 - 3701342 | 30339.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | CK234_02969 | Not Available | Negative | 3701342 - 3703015 | 62975.0 |
| salicylate biosynthesis isochorismate synthase | CK234_02970 | Not Available | Negative | 3703042 - 3704184 | 43169.4 |
| putative esterase | CK234_02971 | Not Available | Negative | 3704181 - 3704588 | 14488.4 |
| putative multidrug export protein, mepa-like | CK234_02972 | Not Available | Negative | 3704680 - 3706029 | 49603.2 |
| coenzyme a disulfide reductase | CK234_02973 | Not Available | Positive | 3706266 - 3708767 | 90757.8 |
| winged helix dna-binding domain protein | CK234_02974 | Not Available | Positive | 3708801 - 3709130 | 12226.9 |
| putative h(+)/cl(-) exchange transporter, clca-like | CK234_02975 | Not Available | Positive | 3709163 - 3710761 | 59693.1 |
| putative bcr | CK234_02976 | Not Available | Positive | 3710771 - 3711361 | 22791.2 |
| putative hth-type transcriptional activator, rhar-like | CK234_02977 | Not Available | Positive | 3711358 - 3713175 | 70600.4 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

