Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4248) | CK234_02958 | Not Available | Negative | 3690761 - 3690985 | 8370.25 |
| protein of unknown function (duf3987) | CK234_02959 | Not Available | Negative | 3691003 - 3692946 | 71602.3 |
| vire n-terminal domain like protein | CK234_02960 | Not Available | Negative | 3692950 - 3693588 | 24326.2 |
| hypothetical protein | CK234_02961 | Not Available | Positive | 3693705 - 3694172 | 17061.2 |
| uvrb-like protein | CK234_02962 | Not Available | Positive | 3694228 - 3696507 | 86544.4 |
| protein of unknown function (duf4250) | CK234_02963 | Not Available | Positive | 3696622 - 3696798 | 6921.42 |
| putative 4-hydroxyphenylacetate catabolism regulatory protein, hpaa-like | CK234_02964 | Not Available | Negative | 3696861 - 3697769 | 35242.4 |
| 2-succinylbenzoate--coa ligase | CK234_02965 | Not Available | Negative | 3698001 - 3699086 | 40646.4 |
| l-ala-d/l-glu epimerase | CK234_02966 | Not Available | Negative | 3699083 - 3700138 | 39820.0 |
| yjbr | CK234_02967 | Not Available | Negative | 3700117 - 3700500 | 14976.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

