Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02948 | Not Available | Negative | 3680157 - 3681098 | 36704.0 |
| protein of unknown function (duf4121) | CK234_02949 | Not Available | Negative | 3681118 - 3681939 | 32115.8 |
| putative tyrosine recombinase, xerc-like | CK234_02950 | Not Available | Negative | 3682807 - 3683394 | 22632.9 |
| dna repair protein radc | CK234_02951 | Not Available | Negative | 3683545 - 3683991 | 16678.1 |
| protein of unknown function (duf3871) | CK234_02952 | Not Available | Negative | 3684077 - 3685096 | 38381.1 |
| hypothetical protein | CK234_02953 | Not Available | Negative | 3685395 - 3687689 | 90108.0 |
| winged helix-turn-helix dna-binding protein | CK234_02954 | Not Available | Negative | 3687891 - 3688535 | 24954.1 |
| hypothetical protein | CK234_02955 | Not Available | Negative | 3688495 - 3688671 | 7123.64 |
| n-acetylmuramoyl-l-alanine amidase | CK234_02956 | Not Available | Negative | 3689110 - 3689607 | 18856.7 |
| putative dna-binding protein, histone-like | CK234_02957 | Not Available | Negative | 3689939 - 3690478 | 19230.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

