Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon trao protein | CK234_02928 | Not Available | Positive | 3665449 - 3666021 | 20845.4 |
| dna primase, catalytic core | CK234_02929 | Not Available | Positive | 3666034 - 3666909 | 33679.9 |
| protein of unknown function (duf3872) | CK234_02930 | Not Available | Positive | 3666946 - 3667509 | 21614.5 |
| hypothetical protein | CK234_02931 | Not Available | Positive | 3667500 - 3668018 | 19262.7 |
| hypothetical protein | CK234_02932 | Not Available | Negative | 3668143 - 3669069 | 35356.3 |
| protein of unknown function (duf4120) | CK234_02933 | Not Available | Negative | 3669136 - 3669426 | 11241.1 |
| hypothetical protein | CK234_02934 | Not Available | Negative | 3669705 - 3670046 | 12468.9 |
| hypothetical protein | CK234_02935 | Not Available | Negative | 3670068 - 3670586 | 20913.8 |
| hypothetical protein | CK234_02936 | Not Available | Negative | 3670597 - 3671307 | 27308.4 |
| hypothetical protein | CK234_02937 | Not Available | Negative | 3671309 - 3671671 | 14128.4 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

