Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf1273) | CK234_02918 | Not Available | Negative | 3655789 - 3656304 | 19671.8 |
| protein of unknown function (duf4134) | CK234_02919 | Not Available | Positive | 3656715 - 3657011 | 10270.6 |
| virb4-like type iv secretion system protein | CK234_02920 | Not Available | Positive | 3657342 - 3659840 | 95880.1 |
| hypothetical protein | CK234_02921 | Not Available | Positive | 3659873 - 3660493 | 24065.5 |
| protein of unknown function (duf4141) | CK234_02922 | Not Available | Positive | 3660544 - 3661173 | 24099.2 |
| conjugative transposon traj protein | CK234_02923 | Not Available | Positive | 3661186 - 3662196 | 37142.7 |
| conjugative transposon trak protein | CK234_02924 | Not Available | Positive | 3662218 - 3662841 | 24045.8 |
| protein of unknown function (duf3989) | CK234_02925 | Not Available | Positive | 3662854 - 3663159 | 11698.1 |
| conjugative transposon tram protein | CK234_02926 | Not Available | Positive | 3663152 - 3664444 | 47030.6 |
| conjugative transposon tran protein (tigr03780) | CK234_02927 | Not Available | Positive | 3664466 - 3665446 | 36751.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

