Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein containing a ferredoxin domain (duf2148) | CK234_02898 | Not Available | Positive | 3638318 - 3638848 | 19120.2 |
| putative phosphatase | CK234_02899 | Not Available | Negative | 3638838 - 3639644 | 30316.9 |
| putative dna recombination protein, rmuc-like | CK234_02900 | Not Available | Positive | 3639740 - 3640975 | 46960.8 |
| mgtc family protein | CK234_02901 | Not Available | Positive | 3640993 - 3641661 | 24548.2 |
| putative sensor protein, srrb-like | CK234_02902 | Not Available | Negative | 3641732 - 3643201 | 55121.1 |
| putative sensor protein, kdpd-like | CK234_02903 | Not Available | Negative | 3643214 - 3644341 | 42652.1 |
| protein of unknown function (duf5131) | CK234_02904 | Not Available | Negative | 3644521 - 3645357 | 32621.7 |
| adp-ribose pyrophosphatase | CK234_02905 | Not Available | Positive | 3645494 - 3646048 | 21545.7 |
| demethylrebeccamycin-d-glucose o-methyltransferase | CK234_02906 | Not Available | Negative | 3646155 - 3646937 | 29535.3 |
| hypothetical protein | CK234_02907 | Not Available | Negative | 3647095 - 3647583 | 18932.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

