Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylgalactosamine-n, n'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-n-acetylgalactosaminyltransferase | CK234_02878 | Not Available | Positive | 3614397 - 3615491 | 42796.4 |
| protein of unknown function (duf1972) | CK234_02879 | Not Available | Positive | 3615764 - 3616894 | 44133.5 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_02880 | Not Available | Positive | 3616900 - 3617736 | 31906.1 |
| putative transposase or invertase | CK234_02881 | Not Available | Positive | 3617814 - 3618764 | 36532.3 |
| pd-(d/e)xk nuclease superfamily protein | CK234_02882 | Not Available | Positive | 3618896 - 3619810 | 36023.6 |
| hypothetical protein | CK234_02883 | Not Available | Negative | 3620078 - 3620359 | 10829.8 |
| dna phosphorothioation system restriction enzyme | CK234_02884 | Not Available | Positive | 3620576 - 3622867 | 87143.8 |
| na(+)-translocating nadh-quinone reductase subunit a | CK234_02885 | Not Available | Positive | 3623113 - 3624462 | 49524.8 |
| na(+)-translocating nadh-quinone reductase subunit b | CK234_02886 | Not Available | Positive | 3624491 - 3625699 | 43554.0 |
| na(+)-translocating nadh-quinone reductase subunit c | CK234_02887 | Not Available | Positive | 3625713 - 3626387 | 24676.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

