Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate 2-kinase | CK234_02868 | Not Available | Negative | 3603330 - 3604469 | 39774.6 |
| cdp-abequose synthase | CK234_02869 | Not Available | Positive | 3604879 - 3605796 | 34687.4 |
| putative o-antigen transporter | CK234_02870 | Not Available | Positive | 3605796 - 3607214 | 52625.3 |
| galnac(5)-dinacbac-pp-undecaprenol beta-1,3-glucosyltransferase | CK234_02871 | Not Available | Positive | 3607211 - 3608221 | 39342.2 |
| putative glycosyltransferase, epsj-like | CK234_02872 | Not Available | Positive | 3608268 - 3609314 | 40398.6 |
| hypothetical protein | CK234_02873 | Not Available | Positive | 3609428 - 3610750 | 50258.8 |
| putative glycosyltransferase | CK234_02874 | Not Available | Positive | 3610762 - 3611544 | 30345.6 |
| had-superfamily subfamily ib hydrolase | CK234_02875 | Not Available | Positive | 3611517 - 3612191 | 26554.1 |
| hypothetical protein | CK234_02876 | Not Available | Positive | 3612188 - 3612988 | 32098.1 |
| gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase | CK234_02877 | Not Available | Positive | 3613246 - 3614400 | 44039.4 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

