Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comea protein | CK234_02858 | Not Available | Positive | 3591581 - 3592483 | 35320.7 |
| alkaline phosphatase 3 precursor | CK234_02859 | Not Available | Negative | 3592480 - 3593898 | 51603.1 |
| hypothetical protein | CK234_02860 | Not Available | Positive | 3594202 - 3594702 | 19273.6 |
| Trna-phe | Not Available | Not Available | Positive | 3594794 - 3594866 | Not Available |
| thiamine-monophosphate kinase | CK234_02862 | Not Available | Negative | 3594984 - 3596024 | 38257.9 |
| purine nucleoside phosphorylase 1 | CK234_02863 | Not Available | Negative | 3596029 - 3596838 | 29940.3 |
| tetraacyldisaccharide 4'-kinase | CK234_02864 | Not Available | Negative | 3596801 - 3597901 | 42222.5 |
| protease 4 | CK234_02865 | Not Available | Negative | 3597909 - 3599690 | 65863.9 |
| nitroreductase family protein | CK234_02866 | Not Available | Positive | 3599824 - 3600429 | 23230.9 |
| bifunctional l-fucose-1-p guanylyltransferase/l-fucokinase protein fkp | CK234_02867 | Not Available | Positive | 3600503 - 3603343 | 105136.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

