Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | CK234_02838 | Not Available | Positive | 3565247 - 3567709 | 93902.1 |
| putative phosphatase, ycdx-like | CK234_02839 | Not Available | Positive | 3567757 - 3568467 | 26532.1 |
| putative low molecular weight protein-tyrosine-phosphatase, yfkj-like | CK234_02840 | Not Available | Positive | 3568475 - 3568945 | 17874.5 |
| putative domain hdig | CK234_02841 | Not Available | Negative | 3568920 - 3570977 | 79191.8 |
| glutamate--trna ligase | CK234_02842 | Not Available | Positive | 3571059 - 3572576 | 57907.3 |
| 3-deoxy-d-manno-octulosonic acid transferase | CK234_02843 | Not Available | Positive | 3572589 - 3573809 | 46876.5 |
| melibiose operon regulatory protein | CK234_02844 | Not Available | Positive | 3574989 - 3575477 | 18915.8 |
| hypothetical protein | CK234_02845 | Not Available | Positive | 3575555 - 3578413 | 105417.0 |
| hypothetical protein | CK234_02846 | Not Available | Positive | 3578552 - 3579208 | 25861.1 |
| nudix domain protein | CK234_02847 | Not Available | Positive | 3579159 - 3580049 | 34227.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

