Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02828 | Not Available | Positive | 3557985 - 3558368 | 15190.0 |
| putative regulatory protein, asnc-like | CK234_02829 | Not Available | Positive | 3558485 - 3558943 | 17087.9 |
| protein of unknown function (duf4491) | CK234_02830 | Not Available | Positive | 3558950 - 3559264 | 12155.1 |
| hypothetical protein | CK234_02831 | Not Available | Positive | 3559933 - 3560661 | 28522.1 |
| hypothetical protein | CK234_02832 | Not Available | Positive | 3560658 - 3560912 | 9832.96 |
| prolyl tri/tetrapeptidyl aminopeptidase precursor | CK234_02833 | Not Available | Negative | 3561508 - 3562818 | 50818.6 |
| hypothetical protein | CK234_02834 | Not Available | Positive | 3562923 - 3563546 | 24607.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CK234_02835 | Not Available | Positive | 3563555 - 3564118 | 21334.7 |
| protein of unknown function (duf2795) | CK234_02836 | Not Available | Positive | 3564190 - 3564411 | 8716.91 |
| outer membrane protein beta-barrel domain protein | CK234_02837 | Not Available | Positive | 3564575 - 3565174 | 21550.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

