Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative heme d1 biosynthesis radical sam protein nirj1 | CK234_02808 | Not Available | Negative | 3534278 - 3535348 | 41092.6 |
| hypothetical protein | CK234_02809 | Not Available | Negative | 3535345 - 3536301 | 36422.5 |
| hypothetical protein | CK234_02810 | Not Available | Negative | 3536291 - 3536452 | 6456.91 |
| hypothetical protein | CK234_02811 | Not Available | Negative | 3536695 - 3539118 | 88632.5 |
| melibiose operon regulatory protein | CK234_02812 | Not Available | Negative | 3539196 - 3539825 | 24697.2 |
| hypothetical protein | CK234_02813 | Not Available | Negative | 3540293 - 3540547 | 9946.91 |
| hypothetical protein | CK234_02814 | Not Available | Negative | 3540719 - 3541369 | 24753.7 |
| axe7a precursor-like acetyl esterase protein | CK234_02815 | Not Available | Negative | 3541474 - 3542784 | 49264.2 |
| protein of unknown function duf45 | CK234_02816 | Not Available | Negative | 3542805 - 3543509 | 27207.3 |
| putative auto-transporter adhesin, head gin domain | CK234_02817 | Not Available | Positive | 3543616 - 3544347 | 25978.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

