Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sufd-like fes cluster assembly protein | CK234_02798 | Not Available | Negative | 3523083 - 3524426 | 50473.4 |
| putative atp-dependent transporter, sufc-like | CK234_02799 | Not Available | Negative | 3524456 - 3525208 | 27654.6 |
| putative sufb-like fes cluster assembly protein | CK234_02800 | Not Available | Negative | 3525236 - 3526687 | 54039.0 |
| colicin v production protein | CK234_02801 | Not Available | Negative | 3526695 - 3527198 | 18078.1 |
| translation initiation factor if-2 | CK234_02802 | Not Available | Negative | 3527337 - 3530348 | 111143.0 |
| putative transcription termination/antitermination protein, nusa-like | CK234_02803 | Not Available | Negative | 3530390 - 3531646 | 47697.0 |
| putative ribosome maturation factor, rimp-like | CK234_02804 | Not Available | Negative | 3531649 - 3532116 | 17915.3 |
| hypothetical protein | CK234_02805 | Not Available | Positive | 3532255 - 3532674 | 15775.0 |
| putative inner membrane transport protein, ydhp-like | CK234_02806 | Not Available | Negative | 3532635 - 3533816 | 42069.9 |
| hypothetical protein | CK234_02807 | Not Available | Negative | 3534009 - 3534257 | 8752.23 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

