Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02788 | Not Available | Negative | 3505363 - 3506964 | 58149.1 |
| hypothetical protein | CK234_02789 | Not Available | Negative | 3507082 - 3507849 | 27524.8 |
| melibiose operon regulatory protein | CK234_02790 | Not Available | Negative | 3507922 - 3508407 | 19011.1 |
| gph family sucrose/h+ symporter | CK234_02791 | Not Available | Negative | 3509113 - 3510468 | 49040.2 |
| 4-alpha-glucanotransferase | CK234_02792 | Not Available | Negative | 3510542 - 3513220 | 104498.0 |
| dna gyrase subunit b | CK234_02793 | Not Available | Negative | 3513548 - 3515512 | 72969.4 |
| beta-galactosidase | CK234_02794 | Not Available | Positive | 3516108 - 3518996 | 110396.0 |
| putative glucosidase, ygjk precursor-like | CK234_02795 | Not Available | Positive | 3519014 - 3520948 | 73006.0 |
| hypothetical protein | CK234_02796 | Not Available | Negative | 3521395 - 3521832 | 16295.1 |
| cysteine desulfurase | CK234_02797 | Not Available | Negative | 3521862 - 3523076 | 45098.1 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

