Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | CK234_00245 | Not Available | Negative | 331485 - 331982 | 18718.6 |
| putative dna-binding protein, histone-like | CK234_00246 | Not Available | Negative | 332395 - 332889 | 18040.5 |
| protein of unknown function (duf4248) | CK234_00247 | Not Available | Negative | 333258 - 333452 | 7367.08 |
| protein of unknown function (duf3987) | CK234_00248 | Not Available | Negative | 333846 - 335651 | 67498.1 |
| vire n-terminal domain like protein | CK234_00249 | Not Available | Negative | 335724 - 336389 | 25080.9 |
| hypothetical protein | CK234_00250 | Not Available | Positive | 336700 - 336861 | 6503.99 |
| nucleotidyltransferase domain protein | CK234_00251 | Not Available | Positive | 336939 - 337232 | 11114.5 |
| protein of unknown function duf86 | CK234_00252 | Not Available | Positive | 337225 - 337617 | 15161.6 |
| putative aaa-atpase | CK234_00253 | Not Available | Positive | 337742 - 339310 | 59948.4 |
| nucleotidyltransferase domain protein | CK234_00254 | Not Available | Positive | 339493 - 339801 | 11591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

