Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein susf/suse family | CK234_02778 | Not Available | Negative | 3492196 - 3492603 | 14967.6 |
| suse-like outer membrane protein | CK234_02779 | Not Available | Negative | 3492678 - 3493334 | 23968.6 |
| susd family protein | CK234_02780 | Not Available | Negative | 3493363 - 3495057 | 63567.8 |
| tonb-linked outer membrane protein, susc/raga family | CK234_02781 | Not Available | Negative | 3495070 - 3498099 | 111498.0 |
| hypothetical protein | CK234_02782 | Not Available | Negative | 3498267 - 3498446 | 7034.63 |
| retaining alpha-galactosidase precursor | CK234_02783 | Not Available | Negative | 3498499 - 3500715 | 84341.1 |
| cyclomaltodextrinase | CK234_02784 | Not Available | Negative | 3500757 - 3502607 | 70876.0 |
| hypothetical protein | CK234_02785 | Not Available | Positive | 3502856 - 3504451 | 62535.7 |
| hypothetical protein | CK234_02786 | Not Available | Negative | 3504558 - 3504854 | 11332.5 |
| hypothetical protein | CK234_02787 | Not Available | Negative | 3504978 - 3505223 | 9481.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

