Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose-proton symporter | CK234_02768 | Not Available | Negative | 3476712 - 3478025 | 48425.4 |
| l-fucose isomerase | CK234_02769 | Not Available | Negative | 3478138 - 3479913 | 65624.0 |
| putative hth-type transcriptional regulator, yurk-like | CK234_02770 | Not Available | Negative | 3479935 - 3480915 | 38069.7 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | CK234_02771 | Not Available | Positive | 3481364 - 3482878 | 55852.0 |
| protein of unknown function (duf3109) | CK234_02772 | Not Available | Positive | 3482981 - 3483562 | 22131.6 |
| porin o- and p-like phosphate-selective protein | CK234_02773 | Not Available | Positive | 3483630 - 3484817 | 44408.7 |
| thermophilic serine proteinase precursor | CK234_02774 | Not Available | Positive | 3485059 - 3486918 | 67221.0 |
| hypothetical protein | CK234_02775 | Not Available | Positive | 3486937 - 3487917 | 34914.3 |
| malto-oligosyltrehalose trehalohydrolase | CK234_02776 | Not Available | Negative | 3488088 - 3490667 | 97663.8 |
| protein of unknown function (duf5115) | CK234_02777 | Not Available | Negative | 3490757 - 3492172 | 51574.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

