Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thiol-disulfide oxidoreductase, resa-like | CK234_02758 | Not Available | Positive | 3465275 - 3466510 | 46333.7 |
| putative transcription elongation factor, grea-like | CK234_02759 | Not Available | Positive | 3466711 - 3467175 | 16780.4 |
| hit-like protein | CK234_02760 | Not Available | Positive | 3467227 - 3467634 | 15016.2 |
| hypothetical protein | CK234_02761 | Not Available | Negative | 3468114 - 3468338 | 8188.72 |
| putative lysine exporter, lyso-like | CK234_02762 | Not Available | Negative | 3468352 - 3468954 | 21649.9 |
| putative lysine exporter, lyso-like | CK234_02763 | Not Available | Negative | 3468951 - 3469232 | 10217.2 |
| susd family protein | CK234_02764 | Not Available | Negative | 3469347 - 3470864 | 57946.4 |
| tonb-linked outer membrane protein, susc/raga family | CK234_02765 | Not Available | Negative | 3470885 - 3474013 | 116518.0 |
| tetratricopeptide repeat protein | CK234_02766 | Not Available | Negative | 3474237 - 3475862 | 63066.8 |
| ribonuclease hii | CK234_02767 | Not Available | Positive | 3475964 - 3476569 | 22930.4 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

