Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4292) | CK234_02738 | Not Available | Positive | 3442435 - 3443268 | 31409.2 |
| putative murein hydrolase activator, envc precursor-like | CK234_02739 | Not Available | Positive | 3443268 - 3444602 | 50668.0 |
| splicing factor, cc1-like family | CK234_02740 | Not Available | Positive | 3445104 - 3445475 | 13160.2 |
| thermolabile glutaminase | CK234_02741 | Not Available | Negative | 3445791 - 3446705 | 34090.9 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | CK234_02742 | Not Available | Negative | 3446719 - 3448563 | 68190.6 |
| n5-carboxyaminoimidazole ribonucleotide mutase | CK234_02743 | Not Available | Negative | 3448647 - 3449156 | 17745.0 |
| glycine cleavage system h protein | CK234_02744 | Not Available | Negative | 3449281 - 3449661 | 14151.4 |
| hypothetical protein | CK234_02745 | Not Available | Negative | 3449698 - 3450354 | 24809.8 |
| rna polymerase sigma-54 factor | CK234_02746 | Not Available | Negative | 3450365 - 3451834 | 56144.2 |
| hypothetical protein | CK234_02747 | Not Available | Positive | 3451963 - 3452193 | 8754.29 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

