Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stage v sporulation protein d | CK234_02728 | Not Available | Negative | 3432414 - 3434594 | 80368.7 |
| hypothetical protein | CK234_02729 | Not Available | Negative | 3434599 - 3434973 | 14479.4 |
| ribosomal rna small subunit methyltransferase h | CK234_02730 | Not Available | Negative | 3434978 - 3435892 | 34333.2 |
| mraz protein | CK234_02731 | Not Available | Negative | 3435889 - 3436353 | 18115.8 |
| hypothetical protein | CK234_02732 | Not Available | Negative | 3436388 - 3436615 | 8935.16 |
| acyltransferase | CK234_02733 | Not Available | Positive | 3436700 - 3437539 | 31809.9 |
| acetyltransferase (gnat) domain protein | CK234_02734 | Not Available | Positive | 3437563 - 3438543 | 37508.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | CK234_02735 | Not Available | Negative | 3438632 - 3439963 | 50252.4 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | CK234_02736 | Not Available | Positive | 3440186 - 3440620 | 15780.1 |
| putative tpr repeat-containing protein, yrrb-like | CK234_02737 | Not Available | Positive | 3440630 - 3442438 | 69691.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

