Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqey-like protein | CK234_02718 | Not Available | Negative | 3420276 - 3420725 | 15932.5 |
| putative cell division protein, ftsz-like | CK234_02719 | Not Available | Negative | 3420747 - 3422051 | 47936.9 |
| putative cell division protein, ftsa-like | CK234_02720 | Not Available | Negative | 3422089 - 3423591 | 54983.8 |
| hypothetical protein | CK234_02721 | Not Available | Negative | 3423595 - 3424332 | 27831.4 |
| udp-n-acetylmuramate--l-alanine ligase | CK234_02722 | Not Available | Negative | 3424329 - 3425705 | 51104.2 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | CK234_02723 | Not Available | Negative | 3425695 - 3426825 | 40466.6 |
| putative lipid ii flippase, ftsw-like | CK234_02724 | Not Available | Negative | 3426890 - 3428287 | 51362.1 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | CK234_02725 | Not Available | Negative | 3428311 - 3429645 | 49945.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CK234_02726 | Not Available | Negative | 3429660 - 3430928 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--ld- lysine ligase | CK234_02727 | Not Available | Negative | 3430941 - 3432395 | 53314.3 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

