Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase/nuclease subunit a | CK234_02708 | Not Available | Positive | 3404258 - 3407434 | 122632.0 |
| putative dna repair protein | CK234_02709 | Not Available | Positive | 3407434 - 3410313 | 110971.0 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | CK234_02710 | Not Available | Negative | 3410388 - 3411215 | 30681.1 |
| replicative dna helicase | CK234_02711 | Not Available | Positive | 3411477 - 3413033 | 57459.0 |
| phenylalanine--trna ligase beta subunit | CK234_02712 | Not Available | Positive | 3413187 - 3415649 | 91165.9 |
| putative transcriptional regulatory protein | CK234_02713 | Not Available | Positive | 3415683 - 3416429 | 28034.9 |
| hypothetical protein | CK234_02714 | Not Available | Negative | 3416706 - 3417374 | 25733.9 |
| hypothetical protein | CK234_02715 | Not Available | Negative | 3417397 - 3418053 | 26197.4 |
| hypothetical protein | CK234_02716 | Not Available | Negative | 3418105 - 3418473 | 12548.0 |
| hypothetical protein | CK234_02717 | Not Available | Negative | 3418952 - 3419263 | 12111.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

