Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| subversion of eukaryotic traffic protein a | CK234_02698 | Not Available | Negative | 3391709 - 3392500 | 31467.0 |
| hypothetical protein | CK234_02699 | Not Available | Negative | 3392502 - 3393641 | 42846.0 |
| hypothetical protein | CK234_02700 | Not Available | Negative | 3393622 - 3394839 | 46876.9 |
| polysaccharide biosynthesis protein | CK234_02701 | Not Available | Negative | 3394955 - 3396322 | 51334.4 |
| hypothetical protein | CK234_02702 | Not Available | Negative | 3396977 - 3397360 | 14820.0 |
| putative transcriptional activator, rfah-like | CK234_02703 | Not Available | Negative | 3397443 - 3397991 | 21158.1 |
| putative bsaa-like glutathione peroxidase | CK234_02704 | Not Available | Negative | 3398861 - 3399400 | 20060.1 |
| putative aaa-atpase | CK234_02705 | Not Available | Positive | 3399611 - 3401383 | 68953.8 |
| putative transcriptional regulatory protein, zrar-like | CK234_02706 | Not Available | Positive | 3401420 - 3402760 | 50136.7 |
| putative sensor protein, fixl-like | CK234_02707 | Not Available | Positive | 3402876 - 3404177 | 48986.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

