Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | CK234_02688 | Not Available | Positive | 3382087 - 3383247 | 44329.1 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_02689 | Not Available | Negative | 3383354 - 3384208 | 31806.9 |
| hypothetical protein | CK234_02690 | Not Available | Positive | 3384215 - 3384445 | 9075.28 |
| udp-gal:alpha-d-glcnac-diphosphoundecaprenol beta-1,4-galactosyltransferase | CK234_02691 | Not Available | Negative | 3384349 - 3385062 | 27718.8 |
| polysaccharide pyruvyl transferase | CK234_02692 | Not Available | Negative | 3385062 - 3385409 | 13327.3 |
| polysaccharide pyruvyl transferase | CK234_02693 | Not Available | Negative | 3385426 - 3386139 | 26873.5 |
| nadh-quinone oxidoreductase, chain i | CK234_02694 | Not Available | Negative | 3386136 - 3387344 | 45369.1 |
| putative glycosyltransferase, epsf-like | CK234_02695 | Not Available | Negative | 3387317 - 3388423 | 41992.2 |
| cdp-glycerol:poly(glycerophosphate) glycerophosphotransferase | CK234_02696 | Not Available | Negative | 3388425 - 3389579 | 44847.4 |
| threonine-phosphate decarboxylase | CK234_02697 | Not Available | Negative | 3389576 - 3391411 | 70713.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

