Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylgalactosamine-n, n'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-n-acetylgalactosaminyltransferase | CK234_00235 | Not Available | Positive | 323603 - 324757 | 44801.2 |
| putative glycosyltransferase | CK234_00236 | Not Available | Positive | 324780 - 325598 | 31859.5 |
| putative glycosyltransferase | CK234_00237 | Not Available | Positive | 325595 - 326293 | 27173.0 |
| had-superfamily subfamily ib hydrolase | CK234_00238 | Not Available | Positive | 326401 - 327063 | 26056.7 |
| hypothetical protein | CK234_00239 | Not Available | Positive | 327009 - 327848 | 33046.6 |
| n-acetylglucosaminyl-diphospho-decaprenol l-rhamnosyltransferase | CK234_00240 | Not Available | Positive | 327936 - 328748 | 31879.8 |
| gdp-6-deoxy-d-mannose reductase | CK234_00241 | Not Available | Positive | 328760 - 329773 | 37943.9 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_00242 | Not Available | Positive | 329770 - 330579 | 31228.6 |
| hypothetical protein | CK234_00243 | Not Available | Positive | 330689 - 330850 | 6519.78 |
| putative transposase or invertase | CK234_00244 | Not Available | Positive | 330855 - 331226 | 13781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

