Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02678 | Not Available | Positive | 3367704 - 3367916 | 7765.92 |
| hypothetical protein | CK234_02679 | Not Available | Positive | 3367913 - 3368257 | 13312.2 |
| hypothetical protein | CK234_02680 | Not Available | Positive | 3368275 - 3368619 | 12439.6 |
| putative glutamine amidotransferase | CK234_02681 | Not Available | Positive | 3369159 - 3371015 | 68719.0 |
| hypothetical protein | CK234_02682 | Not Available | Positive | 3371292 - 3371729 | 17467.4 |
| acidobacterial duplicated orphan permease | CK234_02683 | Not Available | Negative | 3371790 - 3374114 | 86932.1 |
| acidobacterial duplicated orphan permease | CK234_02684 | Not Available | Negative | 3374129 - 3376441 | 87524.2 |
| putative lipoprotein-releasing system atp-binding protein, lold-like | CK234_02685 | Not Available | Negative | 3376461 - 3377135 | 24853.2 |
| acidobacterial duplicated orphan permease | CK234_02686 | Not Available | Negative | 3377170 - 3379479 | 86384.6 |
| dcp-like peptidyl-dipeptidase | CK234_02687 | Not Available | Positive | 3379801 - 3381906 | 79119.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

