Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pyridoxal phosphate-dependent acyltransferase | CK234_02668 | Not Available | Positive | 3357592 - 3358827 | 45889.5 |
| hypothetical protein | CK234_02669 | Not Available | Positive | 3358830 - 3359546 | 27626.6 |
| hypothetical protein | CK234_02670 | Not Available | Negative | 3359815 - 3360795 | 37781.6 |
| relaxase/mobilization nuclease domain protein | CK234_02671 | Not Available | Negative | 3360823 - 3362223 | 53781.8 |
| mobc-like bacterial mobilization protein | CK234_02672 | Not Available | Negative | 3362220 - 3362558 | 12993.9 |
| aaa domain protein | CK234_02673 | Not Available | Positive | 3362957 - 3363655 | 26322.3 |
| protein of unknown function (duf3408) | CK234_02674 | Not Available | Positive | 3363660 - 3364130 | 17421.8 |
| hypothetical protein | CK234_02675 | Not Available | Positive | 3364806 - 3365957 | 45202.0 |
| anaerobic regulatory protein | CK234_02676 | Not Available | Positive | 3366203 - 3366796 | 23463.4 |
| conjugative transposon trao protein | CK234_02677 | Not Available | Positive | 3367106 - 3367684 | 22194.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

