Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02658 | Not Available | Negative | 3352060 - 3352506 | 17864.8 |
| putative addiction module antidote protein, higa family-like | CK234_02659 | Not Available | Positive | 3353028 - 3353543 | 20267.4 |
| putative type iv ta system abieii-like nucleotidyl transferase toxin | CK234_02660 | Not Available | Positive | 3353540 - 3354211 | 25965.9 |
| protein of unknown function (duf3791) | CK234_02661 | Not Available | Positive | 3354244 - 3354495 | 9758.85 |
| soj-like sporulation initiation inhibitor protein | CK234_02662 | Not Available | Positive | 3354696 - 3355004 | 11446.0 |
| soj-like sporulation initiation inhibitor protein | CK234_02663 | Not Available | Positive | 3355088 - 3355372 | 10564.6 |
| hypothetical protein | CK234_02664 | Not Available | Positive | 3355376 - 3355630 | 9275.31 |
| hypothetical protein | CK234_02665 | Not Available | Negative | 3355783 - 3356058 | 10686.7 |
| hypothetical protein | CK234_02666 | Not Available | Negative | 3356261 - 3356872 | 22921.5 |
| hypothetical protein | CK234_02667 | Not Available | Negative | 3356904 - 3357449 | 21537.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

