Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abieii-like type iv ta system toxin with aaa domain | CK234_02648 | Not Available | Positive | 3342114 - 3343412 | 49583.5 |
| rlob-like protein | CK234_02649 | Not Available | Positive | 3343417 - 3344037 | 24678.9 |
| putative tir-like domain (duf1863) protein | CK234_02650 | Not Available | Positive | 3344034 - 3344582 | 21464.2 |
| sir2-like domain protein | CK234_02651 | Not Available | Positive | 3344593 - 3346008 | 53804.2 |
| putative tir-like domain (duf1863) protein | CK234_02652 | Not Available | Positive | 3346011 - 3346622 | 23422.2 |
| hypothetical protein | CK234_02653 | Not Available | Positive | 3346733 - 3346906 | 6516.66 |
| hypothetical protein | CK234_02654 | Not Available | Positive | 3347231 - 3349081 | 71758.0 |
| hypothetical protein | CK234_02655 | Not Available | Positive | 3349122 - 3349442 | 12637.2 |
| hin-like dna-invertase | CK234_02656 | Not Available | Positive | 3349490 - 3350083 | 22332.1 |
| dna repair protein radc | CK234_02657 | Not Available | Negative | 3350248 - 3350865 | 23429.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

