Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_02638 | Not Available | Negative | 3332313 - 3335453 | 116301.0 |
| hypothetical protein | CK234_02639 | Not Available | Positive | 3336128 - 3336304 | 6582.92 |
| hypothetical protein | CK234_02640 | Not Available | Positive | 3337138 - 3337395 | 9564.9 |
| nveala protein | CK234_02641 | Not Available | Positive | 3337409 - 3337657 | 8846.8 |
| tolb-like 6-blade propeller-like protein | CK234_02642 | Not Available | Positive | 3337851 - 3338858 | 39205.5 |
| transposase is66 family protein | CK234_02643 | Not Available | Positive | 3339440 - 3339832 | 14897.0 |
| hypothetical protein | CK234_02644 | Not Available | Negative | 3340010 - 3340225 | 8217.78 |
| virulence protein rhum family protein | CK234_02645 | Not Available | Positive | 3340702 - 3341016 | 11797.1 |
| hypothetical protein | CK234_02646 | Not Available | Positive | 3341041 - 3341412 | 14288.2 |
| hypothetical protein | CK234_02647 | Not Available | Negative | 3341371 - 3341607 | 9382.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

