Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nveala protein | CK234_02628 | Not Available | Positive | 3318092 - 3318397 | 10797.9 |
| 6-bladed beta-propeller | CK234_02629 | Not Available | Positive | 3318554 - 3319726 | 45205.8 |
| hypothetical protein | CK234_02630 | Not Available | Positive | 3319710 - 3320336 | 24703.2 |
| signal peptidase i | CK234_02631 | Not Available | Positive | 3320414 - 3321277 | 33458.9 |
| o-antigen ligase | CK234_02632 | Not Available | Positive | 3321287 - 3322948 | 62267.4 |
| hypothetical protein | CK234_02633 | Not Available | Positive | 3323084 - 3323653 | 22651.9 |
| hypothetical protein | CK234_02634 | Not Available | Positive | 3323698 - 3325590 | 72380.1 |
| 6-bladed beta-propeller | CK234_02635 | Not Available | Positive | 3326409 - 3327563 | 44409.1 |
| alpha-l-fucosidase | CK234_02636 | Not Available | Negative | 3328583 - 3330442 | 69529.4 |
| susd family protein | CK234_02637 | Not Available | Negative | 3330621 - 3332294 | 64058.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

