Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain protein | CK234_02618 | Not Available | Positive | 3295048 - 3295986 | 36479.4 |
| hypothetical protein | CK234_02619 | Not Available | Positive | 3296022 - 3296426 | 16136.2 |
| hypothetical protein | CK234_02620 | Not Available | Negative | 3296487 - 3297302 | 31269.6 |
| cro/c1-type hth dna-binding domain protein | CK234_02621 | Not Available | Positive | 3297520 - 3297732 | 8193.06 |
| helicase/secretion neighborhood putative deah-box helicase | CK234_02622 | Not Available | Positive | 3297750 - 3302936 | 199912.0 |
| putative rna polymerase-associated protein, rapa-like | CK234_02623 | Not Available | Positive | 3302942 - 3305821 | 110423.0 |
| type ii restriction m6 adenine dna methyltransferase, alw26i/eco31i/esp3i family | CK234_02624 | Not Available | Positive | 3305837 - 3309976 | 158924.0 |
| hypothetical protein | CK234_02625 | Not Available | Positive | 3309966 - 3314573 | 178004.0 |
| putative dna helicase | CK234_02626 | Not Available | Positive | 3314577 - 3316805 | 83863.8 |
| mutator family transposase | CK234_02627 | Not Available | Positive | 3316878 - 3317270 | 14393.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

