Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trna modification gtpase, mnme-like | CK234_02608 | Not Available | Positive | 3285147 - 3286649 | 55474.5 |
| dna binding domain, excisionase family | CK234_02609 | Not Available | Positive | 3286693 - 3287796 | 43067.5 |
| putative tyrosine recombinase, xerd-like | CK234_02610 | Not Available | Positive | 3287889 - 3288995 | 43142.5 |
| hypothetical protein | CK234_02611 | Not Available | Positive | 3289193 - 3289960 | 28768.7 |
| hypothetical protein | CK234_02612 | Not Available | Negative | 3289970 - 3290542 | 21978.4 |
| hypothetical protein | CK234_02613 | Not Available | Negative | 3290547 - 3291455 | 34742.2 |
| dna binding domain, excisionase family | CK234_02614 | Not Available | Positive | 3291706 - 3292074 | 14046.1 |
| protein of unknown function (duf3987) | CK234_02615 | Not Available | Positive | 3292086 - 3293453 | 52440.8 |
| hypothetical protein | CK234_02616 | Not Available | Positive | 3293537 - 3294610 | 41774.1 |
| mobc-like bacterial mobilization protein | CK234_02617 | Not Available | Positive | 3294750 - 3295058 | 11905.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

