Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative member of dmt superfamily (duf486) | CK234_02598 | Not Available | Negative | 3277052 - 3277264 | 8365.38 |
| hypothetical protein | CK234_02599 | Not Available | Negative | 3277504 - 3277752 | 9633.13 |
| hypothetical protein | CK234_02600 | Not Available | Positive | 3278525 - 3278746 | 8477.08 |
| hypothetical protein | CK234_02601 | Not Available | Negative | 3278919 - 3279095 | 6531.15 |
| putative trna 2-thiocytidine biosynthesis protein, ttca-like | CK234_02602 | Not Available | Negative | 3279440 - 3280195 | 29155.8 |
| anaphase-promoting complex, cyclosome, subunit 3 | CK234_02603 | Not Available | Positive | 3280306 - 3281748 | 55467.2 |
| nfed-like c-terminal, partner-binding | CK234_02604 | Not Available | Positive | 3281762 - 3282232 | 17146.5 |
| sigmaw regulon antibacterial | CK234_02605 | Not Available | Positive | 3282378 - 3283376 | 35992.8 |
| purine nucleoside phosphorylase deod-type | CK234_02606 | Not Available | Positive | 3283570 - 3284448 | 32767.5 |
| free methionine-r-sulfoxide reductase | CK234_02607 | Not Available | Positive | 3284657 - 3285142 | 18138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

