Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain protein | CK234_02588 | Not Available | Positive | 3270382 - 3270687 | 12084.8 |
| helix-turn-helix domain protein | CK234_02589 | Not Available | Positive | 3270707 - 3271003 | 11888.6 |
| hypothetical protein | CK234_02590 | Not Available | Positive | 3271000 - 3271311 | 12511.2 |
| putative tyrosine recombinase, xerd-like | CK234_02591 | Not Available | Negative | 3271378 - 3272679 | 50395.7 |
| putative tyrosine recombinase, xerd-like | CK234_02592 | Not Available | Negative | 3272703 - 3273926 | 46667.5 |
| hypothetical protein | CK234_02593 | Not Available | Positive | 3274769 - 3275014 | 9541.36 |
| hypothetical protein | CK234_02594 | Not Available | Positive | 3275016 - 3275426 | 15601.8 |
| hypothetical protein | CK234_02595 | Not Available | Positive | 3275436 - 3276077 | 25290.0 |
| lipocalin-like domain protein | CK234_02596 | Not Available | Positive | 3276130 - 3276585 | 17170.0 |
| putative member of dmt superfamily (duf486) | CK234_02597 | Not Available | Negative | 3276648 - 3277019 | 14121.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

