Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein | CK234_00225 | Not Available | Positive | 312634 - 314487 | 71629.4 |
| putative tyrosine recombinase, xerc-like | CK234_00226 | Not Available | Positive | 314571 - 315773 | 46766.8 |
| hypothetical protein | CK234_00227 | Not Available | Positive | 315928 - 316083 | 5921.5 |
| hypothetical protein | CK234_00228 | Not Available | Positive | 316253 - 317086 | 32255.6 |
| hypothetical protein | CK234_00229 | Not Available | Positive | 317163 - 318701 | 58337.6 |
| coenzyme f420 hydrogenase/dehydrogenase, beta subunit c terminus | CK234_00230 | Not Available | Positive | 318808 - 319977 | 44519.2 |
| polysaccharide pyruvyl transferase | CK234_00231 | Not Available | Positive | 320052 - 321227 | 45976.5 |
| hypothetical protein | CK234_00232 | Not Available | Positive | 321187 - 321864 | 26088.6 |
| hypothetical protein | CK234_00233 | Not Available | Positive | 321978 - 322334 | 13382.2 |
| hypothetical protein | CK234_00234 | Not Available | Positive | 322334 - 323578 | 48683.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

