Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnab-like helicase c terminal domain protein | CK234_02528 | Not Available | Negative | 3201692 - 3203692 | 76935.6 |
| protein of unknown function (duf4373) | CK234_02529 | Not Available | Negative | 3203689 - 3205182 | 56181.9 |
| putative toxin-antitoxin system toxin component, pin family | CK234_02530 | Not Available | Negative | 3205781 - 3206113 | 12799.2 |
| hypothetical protein | CK234_02531 | Not Available | Negative | 3206202 - 3206417 | 8582.31 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_02532 | Not Available | Negative | 3206606 - 3207538 | 35487.7 |
| putative n-acetylmannosaminyltransferase | CK234_02533 | Not Available | Negative | 3207564 - 3208313 | 29149.8 |
| udp-galactopyranose mutase | CK234_02534 | Not Available | Negative | 3208341 - 3209588 | 48904.4 |
| hypothetical protein | CK234_02535 | Not Available | Negative | 3209617 - 3210561 | 37883.7 |
| alpha-d-kanosaminyltransferase | CK234_02536 | Not Available | Negative | 3210682 - 3211479 | 31296.0 |
| putative glycosyltransferase | CK234_02537 | Not Available | Negative | 3211939 - 3212682 | 28391.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

