Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain (duf2582) | CK234_02518 | Not Available | Negative | 3191986 - 3192189 | 7433.15 |
| c_gcaxxg_c_c family probable redox protein | CK234_02519 | Not Available | Negative | 3192346 - 3192849 | 18588.2 |
| glycerate dehydrogenase | CK234_02520 | Not Available | Negative | 3192893 - 3193849 | 34358.8 |
| replication-associated recombination protein a | CK234_02521 | Not Available | Negative | 3194020 - 3195297 | 47220.9 |
| hypothetical protein | CK234_02522 | Not Available | Positive | 3195538 - 3197613 | 78210.5 |
| hypothetical protein | CK234_02523 | Not Available | Positive | 3197645 - 3198721 | 39478.4 |
| protein of unknown function (duf4248) | CK234_02524 | Not Available | Negative | 3198945 - 3199163 | 8477.25 |
| putative dna-binding protein, histone-like | CK234_02525 | Not Available | Positive | 3199515 - 3200003 | 17535.0 |
| n-acetylmuramoyl-l-alanine amidase | CK234_02526 | Not Available | Positive | 3200263 - 3200679 | 15868.4 |
| hypothetical protein | CK234_02527 | Not Available | Positive | 3201010 - 3201324 | 13007.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

