Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase 1 | CK234_02508 | Not Available | Positive | 3177940 - 3178902 | 34758.9 |
| putative copper homeostasis protein, cutc-like | CK234_02509 | Not Available | Positive | 3179203 - 3180066 | 31395.5 |
| transglutaminase-like superfamily protein | CK234_02510 | Not Available | Negative | 3180158 - 3182821 | 99180.9 |
| ion channel | CK234_02511 | Not Available | Negative | 3182903 - 3183637 | 28208.9 |
| glutamate/gamma-aminobutyrate antiporter | CK234_02512 | Not Available | Positive | 3183804 - 3185381 | 56520.8 |
| putative sensor histidine kinase, yycg-like | CK234_02513 | Not Available | Positive | 3185598 - 3187871 | 87664.4 |
| putative na(+)/h(+) antiporter, nhaa-like | CK234_02514 | Not Available | Negative | 3187874 - 3189214 | 48656.6 |
| elongation factor 4 | CK234_02515 | Not Available | Negative | 3189346 - 3191127 | 66375.4 |
| hypothetical protein | CK234_02516 | Not Available | Negative | 3191211 - 3191603 | 14724.7 |
| hica-like toxin of bacterial toxin-antitoxin system | CK234_02517 | Not Available | Negative | 3191643 - 3191831 | 6962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

